Twice Baked Butternut Squash

Section: Wholesome Meals for Every Day

This twice baked butternut squash features a creamy, savory filling made with Greek yogurt and parmesan cheese. The squash halves are roasted until tender, then the flesh is mashed with tangy yogurt and rich cheese before being spooned back into the shells. Baked again until golden and bubbly, the dish delivers a wonderful contrast of caramelized edges and a soft, flavorful middle. Finished with a sprinkle of parmesan, this preparation brings out the natural sweetness of butternut and adds a luscious, velvety texture, making it a comforting addition to any meal.

Savor by Sophie official logo
Created By Sophie
Updated on Sun, 04 Jan 2026 22:36:55 GMT
A plate of food with a recipe on the side. Save
A plate of food with a recipe on the side. | savorbysophie.com

Twice baked butternut squash is my secret weapon at autumn gatherings creamy comforting and layered with flavor all while being a little unexpected at the dinner table. It is one of those dishes that always earns recipe requests and never leaves leftovers.

My family was skeptical the first time I served these but one bite made believers out of everyone Even my picky cousin went back for seconds last Thanksgiving.

Ingredients

  • Butternut squash: look for a medium squash that feels heavy for its size and has no soft spots or bruises
  • Plain Greek yogurt: adds creaminess and subtle tang Choose full fat yogurt for the richest texture
  • Grated parmesan cheese: pick high quality cheese for real nutty flavor Grate it fresh if possible
  • Avocado or olive oil: brings out the natural sweetness of the squash Use a fruity extra virgin olive oil or a mild avocado oil
  • Sea salt and freshly ground black pepper: brings balance and rounds out all the flavors Freshly ground pepper makes a big difference

Instructions

Prepare and season the squash:
Cut the squash in half lengthwise and scoop out the seeds Arrange both pieces cut side up in a baking dish large enough to fit without crowding Drizzle with oil and season generously with salt and pepper making sure to rub it in evenly for good coverage
Roast the squash:
Bake at 425 degrees f for 35 to 45 minutes or until the flesh is just fork tender The outer surface should be easily pierced but not falling apart This roasting adds deep caramelized flavor to the squash
Scoop and make the filling:
Let the squash cool enough to handle Using a spoon carefully scoop most of the tender flesh into a large bowl leaving about a quarter inch border inside the shells Take your time with this step to avoid tearing the skins
Mix and mash the filling:
Add the Greek yogurt half a cup of parmesan more salt and pepper to the roasted squash in the bowl Using a fork mash everything together until the mix is smooth and creamy but still has a bit of texture You want every bite to be infused with tangy richness
Fill and top the squash shells:
Spoon the creamy squash mixture back into the hollowed shells Spread it evenly and sprinkle the tops with the remaining parmesan for a beautiful golden crust later
Bake and broil for golden tops:
Return the filled shells to the oven and bake for 10 minutes or until the dish is heated through Finish with a couple minutes under the broiler to melt and brown the cheese until bubbly and crisp
Serve hot:
Remove from the oven and serve immediately These are best eaten fresh while the tops are still crunchy
Two baked potatoes with cheese and herbs.
Two baked potatoes with cheese and herbs. | savorbysophie.com

My favorite ingredient here is definitely the parmesan cheese I love how it forms an irresistibly thin gold crust and fills the kitchen with that nutty salty scent that announces dinner is ready Growing up everyone knew this was coming when they smelled that cheese under the broiler it is a food memory I cherish

Storage Tips

Twice baked butternut squash can be cooled fully and stored in an airtight container in the fridge for up to three days To reheat bake covered at 350 degrees until warmed through The topping will not be quite as crisp as fresh but the flavor stays delicious

Ingredient Substitutions

If you do not have Greek yogurt try sour cream or ricotta cheese for a similar creamy base For dairy free guests use a thick plain coconut yogurt and a plant based cheese Substitute sweet potato if you cannot find butternut squash

Serving Suggestions

This dish shines as a main for vegetarians topped with toasted nuts or served with a crisp salad For a hearty meal pair alongside roasted chicken or turkey It is also lovely alongside other autumn vegetables at a holiday table

Cultural and Seasonal Context

Stuffed and twice baked vegetables are a comfort food tradition around the world This recipe celebrates the creamy richness of butternut squash a favorite at North American harvest and winter feasts Greek yogurt brings a lighter modern touch but keeps it deeply satisfying

Seasonal Adaptations

In spring swap in delicata or acorn squash for a lighter flavor In late summer try it with roasted tomatoes or wilted greens mixed in For winter simply add a touch of nutmeg or sage for added warmth

Two baked potatoes with cheese and herbs.
Two baked potatoes with cheese and herbs. | savorbysophie.com

These twice baked squash are guaranteed to impress at your next gathering Serve hot crispy and share the leftovers—if you have any

Common Recipe Questions

→ How do I prevent the squash shells from breaking?

Scoop the flesh gently, leaving a 1/4-inch border in the shells to keep them sturdy for the second bake.

→ Can I use a different cheese besides parmesan?

Yes, alternatives like pecorino or aged cheddar can be used, though flavor and melting characteristics will vary.

→ Is it possible to make this dish ahead of time?

You can prepare the filled squash up to the final bake. Store in the refrigerator, then bake and broil before serving.

→ What is the best way to achieve a golden topping?

Broil the squash briefly after the second bake so the parmesan forms a golden crust without burning.

→ Can I add herbs or spices to the filling?

Absolutely! Fresh thyme, sage, or a dash of nutmeg complements the creamy squash mixture nicely.

Twice Baked Butternut Squash

Twice-baked butternut squash filled with creamy Greek yogurt and parmesan for a satisfying side dish.

Preparation Time
15 mins
Time to Cook
57 mins
Overall Time
72 mins
Created By: Sophie

Recipe Type: Lunch & Dinner

Level of Expertise: Great for Beginners

Cuisine Style: Modern European

Makes: 2 Portions (2 stuffed butternut squash halves)

Dietary Needs: Plant-Based, No Gluten

Ingredients You’ll Need

→ Main Ingredients

01 1 medium butternut squash, halved lengthwise and seeds removed
02 180 ml plain Greek yogurt
03 60 g finely grated high quality parmesan cheese, divided
04 1 tablespoon avocado oil or olive oil
05 Sea salt, to taste
06 Freshly ground black pepper, to taste

How to Make It

Step 01

Set the oven to 220°C and allow it to fully preheat.

Step 02

Arrange the squash halves cut side up in a suitable baking dish. Drizzle with oil, season with sea salt and black pepper, and rub the seasoning evenly over the surface.

Step 03

Bake in the oven for 35–45 minutes, or until the squash is just fork-tender.

Step 04

Let the squash cool slightly. Using a spoon, carefully scoop most of the flesh into a large bowl, leaving a 0.5 cm border to support the shell.

Step 05

Add the Greek yogurt, 40 g parmesan cheese, a pinch of sea salt, and freshly ground black pepper to the roasted squash flesh. Mash with a fork until creamy and thoroughly combined.

Step 06

Spoon the mixture back into the squash shells. Sprinkle with remaining parmesan cheese.

Step 07

Return the squash to the oven and bake for 10 minutes until heated through, then broil for 2 minutes until the top is golden brown.

Step 08

Transfer to plates and serve immediately while hot.

Extra Tips

  1. Leaving a thin border of squash flesh helps maintain the structure for stuffing and ensures the squash does not collapse during the second bake.

Recommended Tools

  • Sharp chef’s knife
  • Cutting board
  • Large baking dish
  • Mixing bowl
  • Spoon
  • Fork

Allergen Details

Check all the ingredients to avoid allergens, and seek medical advice if you’re unsure.
  • Contains dairy (Greek yogurt, parmesan cheese)

Nutritional Info (Per Serving)

These nutrition details are for informational purposes only and shouldn’t replace professional dietary guidance.
  • Calories: 245
  • Fat: 10 g
  • Carbs: 24 g
  • Protein: 13 g